Lab Tutorials

Tips and Tricks

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Neurocommand in Linux Cluster

Install Container

  1. Search and install Specific Containers
bash containers.sh fmriprep

The above will give you options of which specific containers you want to install. For example:

| fmriprep | 24.1.0 | 20241003 | functional imaging,workflows | Run:

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./local/fetch_containers.sh fmriprep 24.1.0 20241003

Install Singularity containers

Find docker images, and then build it with singularity. For example, install FitLins:

singularity build /path/to/fitlins-<VERSION>.simg \
  docker://poldracklab/fitlins:<VERSION>

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